S. Wörz.
3D Parametric Intensity Models for the Localization of 3D Anatomical Point Landmarks and 3D Segmentation of Human Vessels.
PhD thesis, KOGS, Faculty of Informatics, University of Hamburg, Germany.
DISKI 299, infix/Aka, Berlin, Germany, 2006.
[Aka],
[DISKI 299],
[IOS Press],
[Amazon].
K. Rohr, W.J. Godinez, N. Harder, S. Wörz, J. Mattes, W. Tvaruskó, and R. Eils.
Tracking and Quantitative Analysis of Dynamic Movements of Cells and Particles,
in R.D. Goldman, J.R. Swedlow, and D.L. Spector (eds.),
Live Cell Imaging - A Laboratory Manual, 2nd edition, Cold Spring Harbor Laboratory Press, New York, 239-256, 2010
Articles in journals
F. Rengier, S. Wörz, C. Melzig, S. Ley, C. Fink, N. Benjamin, S. Partovi, H. von Tengg-Kobligk, K. Rohr, H.-U. Kauczor, E. Grünig,
Automated 3D Volumetry of the Pulmonary Arteries Based on Magnetic Resonance Angiography has Potential for Predicting Pulmonary Hypertension,
PLoS One, 11(9), 2016
S. Wörz, J.-P. Schenk, A. Alrajab, H. von Tengg-Kobligk, K. Rohr, R. Arnold,
3D Geometric Analysis of the Pediatric Aorta in 3D MRA Follow-Up Images with Application to Aortic Coarctation,
Methods of Information in Medicine, in press
S. Eck, S. Wörz, K. Müller-Ott, M. Hahn, A. Biesdorf, G. Schotta, K. Rippe, K. Rohr,
A Spherical Harmonics Intensity Model for 3D Segmentation and 3D Shape Analysis of Heterochromatin Foci,
Medical Image Analysis, 32, 18-31, 2016
W. Liao, K. Rohr, C.-K. Kang, Z.-H. Cho, S. Wörz,
Automatic 3D Segmentation and Quantification of Lenticulostriate Arteries from High Resolution 7 Tesla MRA Images,
IEEE Trans. on Image Processing, 25:1, 400-413, 2016
C. Liesche, M. Ludwig, S. Wörz, D.-P. Herten, K. Rohr, J. Beaudouin, R. Eils,
Automated Analysis of Single Molecule Photobleaching Data by Statistical Modeling of Spot Populations,
Biophysical Journal, 109:11, 2352-2362, 2015
K. Stepka, P. Matula, P. Matula, S. Wörz, K. Rohr, M. Kozubek,
Performance and Sensitivity Evaluation of 3D Spot Detection Methods in Confocal Microscopy,
Cytometry Part A, 87:8, 759-772, 2015
D. Kotelis, C. Brenke, S. Wörz, F. Rengier, K. Rohr, H.-U. Kauczor, D. Böckler, H. von Tengg-Kobligk,
Aortic Morphometry at Endograft Position as Assessed by 3D Image Analysis Affects Risk of Type I Endoleak Formation after TEVAR,
Langenbeck's Archives of Surgery, 400:4, 523-529, 2015
S. Osterwald, K. Deeg, I. Chung, D. Parisotto, S. Wörz, K. Rohr, H. Erfle, K. Rippe,
PML Induces Compaction, TRF2 Depletion and DNA Damage Signaling at Telomeres and Promotes their Alternative Lengthening,
Journal of Cell Science, 128, 1887-1900, 2015
S. Wörz and K. Rohr,
Spline-Based Hybrid Image Registration using Landmark and Intensity Information based on Matrix-Valued Non-Radial Basis Functions,
Internat. J. of Computer Vision, 106:1, 76-92, 2014
M. Müller-Eschner, T. Müller, A. Biesdorf, S. Wörz, F. Rengier, D. Böckler, H.-U. Kauczor, K. Rohr, H. von Tengg-Kobligk.
3D morphometry using automated aortic segmentation in native MR angiography: An alternative to contrast enhanced MRA?,
Cardiovascular Diagnosis & Therapy, in press
T.F. Weber, T. Müller, A. Biesdorf, S. Wörz, F. Rengier, T. Heye, T. Holland-Letz, K. Rohr , H.-U. Kauczor, H. von Tengg-Kobligk.
True four-dimensional analysis of thoracic aortic displacement and distension using model-based segmentation of computed tomography angiography,
Int. J. Cardiovascular Imaging, 30:1, 185-194, 2014
M. Hahn, S. Dambacher, S. Dulev, A.Y. Kuznetsova, S. Eck, S. Wörz, D. Sadic, M. Schulte, J.P. Mallm, A. Maiser, P. Debs, H. von Melchner, H. Leonhardt, L. Schermelleh, K. Rohr, K. Rippe, Z. Storchova, G. Schotta.
Suv4-20h2 mediates chromatin compaction and is important for cohesin recruitment to heterochromatin,
Genes & Development, 27:8, 859-872, 2013
A. Biesdorf, K. Rohr, D. Feng, H. von Tengg-Kobligk, F. Rengier, D. Böckler, H.-U. Kauczor, and S. Wörz.
Segmentation and Quantification of the Aortic Arch using Joint 3D Model-Based Segmentation and Elastic Image Registration,
Medical Image Analysis, 16, 1187-1201, 2012
S.W. Seo, C.-K. Kang, S.H. Kim, D.S. Yoon, W. Liao, S. Wörz, K. Rohr, Y.-B. Kim, D.L. Na, and Z.-H. Cho.
Measurements of lenticulostriate arteries using 7T MRI: new imaging markers for subcortical vascular dementia,
Journal of the Neurological Sciences, 322, 200-205, 2012
C.-K. Kang, S. Wörz, W. Liao, C.-A. Park, Y.-B. Kim, C.-W. Park, Y.-B. Lee, K. Rohr, and Z.-H. Cho.
Three dimensional model-based analysis of the lenticulostriate arteries and identification of the vessels correlated to the infarct area: preliminary results,
International Journal of Stroke, 7, 558-563, 2012
S. Osterwald, S. Wörz, J. Reymann, F. Sieckmann, K. Rohr, H. Erfle, and K. Rippe.
A three-dimensional colocalization RNA interference screening platform to elucidate the alternative lengthening of telomeres pathway,
Biotechnology Journal, 7, 103-116, 2012
P. Raiß, B. Sowa, T. Bruckner, S. Eck, S. Wörz, K. Rohr, M. Rickert, and P. Kasten,
Pressurisation Leads to Better Cement Penetration into the Glenoid Bone - A Cadaveric Study,
Journal of Bone & Joint Surgery, 94-B, 671-677, 2012
F. Rengier, S. Wörz, W.J. Godinez, H. Schumacher, D. Böckler, K. Rohr, H.-U. Kauczor, and H. von Tengg-Kobligk.
Development of In-vivo Quantitative Geometric Mapping of the Aortic Arch for Advanced Endovascular Aortic Repair: Feasibility and Preliminary Results,
Journal of Vascular and Interventional Radiology, 22:7, 980-986, 2011
S. Wörz, P. Sander, M. Pfannmöller, R.J. Rieker, S. Joos, G. Mechtersheimer, P. Boukamp, P. Lichter, and K. Rohr.
3D Geometry-Based Quantification of Colocalizations in Multi-Channel 3D Microscopy Images of Human Soft Tissue Tumors,
IEEE Trans. on Medical Imaging, 29:8, 1474-1484, 2010
S. Wörz, H. von Tengg-Kobligk, V. Henninger, F. Rengier, H. Schumacher, D. Böckler, H.-U. Kauczor, and K. Rohr.
3D Quantification of the Aortic Arch Morphology in 3D CTA Data for Endovascular Aortic Repair,
IEEE Trans. on Biomedical Engineering, 57:10, 2359-2368, 2010
S. Wörz, M.-L. Winz, and K. Rohr.
Geometric Alignment of 2D Gel Electrophoresis Images,
Methods of Information in Medicine, 48:4, 320-323, 2009
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr.
Deterministic and probabilistic approaches for tracking virus particles in time-lapse fluorescence microscopy image sequences,
Medical Image Analysis, 13, 325-342, 2009
S. Wörz and K. Rohr.
Physics-based elastic registration using non-radial basis functions and including landmark localization uncertainties,
Computer Vision and Image Understanding, 111, 263-274, 2008
L. Maier-Hein, S.A. Müller, F. Pianka, S. Wörz, A. Seitel, B.P. Müller-Stich, K. Rohr, B.M. Schmied, H.-P. Meinzer, and I. Wolf.
Respiratory motion compensation for CT-guided interventions in the liver,
Computer Aided Surgery, 13:2, 125-138, 2008
S. Wörz and K. Rohr.
Cramér-Rao Bounds for Estimating the Position and Width of 3D Tubular Structures and Analysis of Thin Structures with Application to Vascular Images.
J. of Mathematical Imaging and Vision, 30:2, 167-180, 2008
S. Heinzer, S. Wörz, C. Kalla, K. Rohr, and M. Weiss.
A model for the self-organization of exit sites in the endoplasmic reticulum.
J. of Cell Science, 121:1, 55-64, 2008
S. Wörz and K. Rohr.
Segmentation and Quantification of Human Vessels Using a 3-D Cylindrical Intensity Model.
IEEE Trans. on Image Processing, 16:8, 1994-2004, 2007
S. Wörz and K. Rohr.
Localization of anatomical point landmarks in 3D medical images by fitting 3D parametric intensity models.
Medical Image Analysis, 10:1, 41-58, 2006
K. Rohr, P. Cathier, and S. Wörz.
Elastic Registration of Electrophoresis Images Using Intensity Information and Point Landmarks.
Pattern Recognition, 37:5, 1035-1048, 2004
Conference's articles
2016
S. Wörz, P. Hoegen, W. Liao, M. Müller-Eschner, H.-U. Kauczor, H. von Tengg-Kobligk, and K. Rohr,
Framework for Quantitative Evaluation of 3D Vessel Segmentation Approaches using Vascular Phantoms in Conjunction with 3D Landmark Localization and Registration,
Proc. SPIE Medical Imaging 2016: Image Processing (MI’16),
San Diego, CA/USA, Feb. 2016, SPIE
2015
S. Wörz, H. von Tengg-Kobligk, and K. Rohr,
3D Statistical Models of the Aorta and the Supra-Aortic Branches,
Proc. 12th IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15),
New York City, NY/USA, 2015
A. Biesdorf, S. Wörz, H. von Tengg-Kobligk, K. Rohr, C. Schnörr, C.,
3D Segmentation of Vessels by Incremental Implicit Polynomial Fitting and Convex Optimization,
Proc. 12th IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15),
New York City, NY/USA, 2015
2014
S. Wörz, A. Alrajab, R. Arnold, J. Eichhorn, H. von Tengg-Kobligk, J.-P. Schenk, K. Rohr.
3D geometric analysis of the aorta in 3D MRA follow-up pediatric image data,
Proc. SPIE Medical Imaging 2014: Image Processing (MI'14),
San Diego, CA/USA, Feb. 2014, SPIE
S. Eck, S. Wörz, K. Müller-Ott, M. Hahn, G. Schotta, K. Rippe, K. Rohr.
3D shape analysis of heterochromatin foci based on a 3D spherical harmonics intensity model,
Proc. SPIE Medical Imaging 2014: Image Processing (MI'14),
San Diego, CA/USA, Feb. 2014, SPIE
S. Wörz,
3D Model-Based Segmentation of 3D Biomedical Images,
Proc. Mathematical and Engineering Methods in Computer Science (MEMICS'14),
Lecture Notes in Computer Science 8934,
Telc, Czech Republik, Oct. 2014, Springer Berlin Heidelberg
S. Wörz, A. Alrajab, R. Arnold, J. Eichhorn, H. von Tengg-Kobligk, J.-P. Schenk, and K. Rohr,
Quantification of the Aortic Morphology in Follow-Up 3D-MRA Images of Children,
Proc. Bildverarbeitung für die Medizin (BVM’14),
Informatik aktuell, Aachen, Germany, March 2014, Springer Berlin Heidelberg.
J. Hennies, J.-P. Bergeest, S. Eck, K. Rohr, and S. Wörz,
Cell Segmentation and Cell Splitting Based on Gradient Flow Tracking in Microscopic Images,
Proc. Bildverarbeitung für die Medizin (BVM’14),
Informatik aktuell, Aachen, Germany, March 2014, Springer Berlin Heidelberg.
2013
W. Liao, K. Rohr and S. Wörz.
Globally Optimal Curvature-Regularized Fast Marching for Vessel Segmentation,
Proc. Sixteenth Internat. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'13),
Nagoya, Japan, Sept. 2013
S. Eck, K. Rohr, A. Biesdorf, K. Müller-Ott, K. Rippe, and S. Wörz.
A 3D intensity model based on spherical harmonics for automatic 3D segmentation of heterochromatin foci,
Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13),
San Francisco, CA/USA, April 2013
S. Eck, S. Wörz, A. Biesdorf, K. Müller-Ott, K. Rippe, and K. Rohr.
Segmentation of heterochromatin foci using a 3D spherical harmonics intensity model,
Proc. Bildverarbeitung für die Medizin (BVM'13),
Heidelberg, Germany, March 2013.
BVM award: Best scientific contribution
2012
W. Liao, S. Wörz, and K. Rohr.
Globally Minimal Path Method Using Dynamic Speed Functions Based on Progressive Wave Propagation,
Proc. 11th Asian Conference on Computer Vision (ACCV’12),
Daejeon, Korea, November 2012
K. Rohr and S. Wörz.
An Extension of Thin-Plate Splines for Image Registration with Radial Basis Functions,
Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12),
Barcelona, Spain, May 2012
W. Liao, K. Rohr, C.-K. Kang, Z.-H. Cho, and S. Wörz.
Automatic Human Brain Vessel Segmentation from 3D 7 Tesla MRA Images using Fast Marching with Anisotropic Directional Prior,
Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12),
Barcelona, Spain, May 2012
S. Wörz, A. Biesdorf, and K. Rohr.
Elastic Registration based on Matrix-Valued Spline Functions and Direct Integration of Landmarks and Intensities,
Proc. SPIE Medical Imaging 2012: Image Processing (MI’12),
San Diego, CA/USA, Feb. 2012, SPIE
W. Liao, S. Wörz, and K. Rohr.
Vessel Segmentation Using An Iterative Fast Marching Approach with Directional Prior,
Proc. SPIE Medical Imaging 2012: Image Processing (MI’12),
San Diego, CA/USA, Feb. 2012, SPIE
S. Eck, K. Rohr, K. Müller-Ott, K. Rippe, and S. Wörz.
Combined Model-Based and Region-Adaptive 3D Segmentation and 3D Co-localization Analysis of Heterochromatin Foci,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'12),
Informatik aktuell, Berlin, Germany, March 2012, Springer Berlin Heidelberg
2011
S. Wörz, E. Reinz, A. Alonso, and K. Rohr.
3D Model-Based Quantification of EGF Receptor Internalization from Three-Channel 3D Microscopy Images,
Proc. Sixth International Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB'11),
Heidelberg, Germany, Sept. 2011
A. Biesdorf, S. Wörz, T. Müller, T.F. Weber, T. Heye, W. Hosch, H. von Tengg-Kobligk, and K. Rohr.
Model-Based Segmentation and Motion Analysis of the Thoracic Aorta from 4D ECG-Gated CTA Images,
Proc. Fourteenth Internat. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI’11),
Lecture Notes in Computer Science 6891, Toronto, Canada, Sept. 2011, Springer Berlin Heidelberg
W. Liao, K. Rohr, C.-K. Kang, Z.-H. Cho, and S. Wörz.
A Generative MRF Approach for Automatic 3D Segmentation of Cerebral Vasculature from 7 Tesla MRA Images,
Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'11),
Chicago, IL/USA, March/April 2011
S. Wörz, H. von Tengg-Kobligk, and K. Rohr.
Model-Based Quantification of Small Tubular Structures in 3D Vascular Images,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'11),
Informatik aktuell, Lübeck, Germany, March 2011, Springer Berlin Heidelberg
[Pdf]
A. Biesdorf, K. Rohr, H. von Tengg-Kobligk, and S. Wörz.
Aortic Arch Quantification using Efficient Joint Segmentation and RegistrationProc. Workshop Bildverarbeitung für die Medizin (BVM'11),
Informatik aktuell, Lübeck, Germany, March 2011, Springer Berlin Heidelberg
[Pdf]
2010
A. Biesdorf, K. Rohr, H. von Tengg-Kobligk, and S. Wörz.
Combined Model-Based Segmentation and Elastic Registration for Accurate Quantification of the Aortic Arch,
Proc. Thirteenth Internat. Conf. on Medical Image Computing and Computer-Assisted Intervention(MICCAI'10),
Lecture Notes in Computer Science, Beijing, China, Sept. 2010, Springer Berlin Heidelberg
S. Wörz, P. Sander, M. Pfannmöller, R.J. Rieker, S. Joos, G. Mechtersheimer, P. Boukamp, P. Lichter, and K. Rohr.
3D Geometry-Based Quantification of Colocalizations in Three-Channel 3D Microscopy Images of Soft Tissue Tumors,
Proc. SPIE Medical Imaging 2010: Biomedical Applications in Molecular, Structural, and Functional Imaging(MI'10),
San Diego, CA/USA, Feb. 2010, SPIE
S. Wörz, H. von Tengg-Kobligk, and K. Rohr.
A new 3D tubular intensity model for quantification of thin vessels in 3D tomographic images,
Proc. SPIE Medical Imaging 2010: Image Processing(MI'10),
San Diego, CA/USA, Feb. 2010, SPIE
P. Matula, F. Verissimo, S. Wörz, R. Eils, R. Pepperkok, and K. Rohr.
Quantification of fluorescent spots in time series of 3D confocal microscopy images of endoplasmic reticulum exit sites based on the HMAX transform,
Proc. SPIE Medical Imaging 2010: Biomedical Applications in Molecular, Structural, and Functional Imaging (MI'10),
San Diego, CA/USA, Feb. 2010, SPIE
S. Wörz, P. Sander, M. Pfannmöller, R.J. Rieker, S. Joos, G. Mechtersheimer, P. Boukamp, P. Lichter, and K. Rohr.
Model-Based Segmentation and Colocalization Quantification in 3D Microscopy Images,
Proc. Workshop Bildverarbeitung für die Medizin(BVM'10),
Informatik aktuell, Aachen, Germany, March 2010, Springer Berlin Heidelberg
[Pdf]
2009
S. Wörz, W.J. Godinez, and K. Rohr.
Segmentation of 3D tubular structures based on 3D intensity models and particle filter tracking,
in J.P.W. Pluim and B.M. Dawant, editors,
Proc. SPIE Medical Imaging 2009: Image Processing (MI'09),
Lake Buena Vista, FL/USA, Feb. 2009, SPIE
S. Wörz, H. von Tengg-Kobligk, V. Henninger, D. Böckler, H.-U. Kauczor, and K. Rohr.
3D Segmentation and Quantification of the Aortic Arch for Endovascular Aortic Repair,
in Proc. Workshop Bildverarbeitung für die Medizin (BVM'09),
Informatik aktuell, Heidelberg, Germany, March 2009, Springer-Verlag Berlin Heidelberg
[Pdf]
S. Wörz, W.J. Godinez, and K. Rohr.
Probabilistic Tracking and Model-Based Segmentation of 3D Tubular Structures,
in Proc. Workshop Bildverarbeitung für die Medizin (BVM'09),
Informatik aktuell, Heidelberg, Germany, March 2009, Springer-Verlag Berlin Heidelberg
[Pdf]
A. Biesdorf, S. Wörz, H. von Tengg-Kobligk, and K. Rohr.
Automatic Detection of Supraaortic Branches and Model-Based Segmentation of the Aortic Arch from 3D CTA Images,
in Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09),
Boston, MA/USA, June 2009
A. Biesdorf, S. Wörz, H.J. Kaiser, C. Stippich, and K. Rohr.
Hybrid Spline-based Multimodal Registration Using Local Measures for Joint Entropy and Mutual Information,
in Proc. Twelfth Internat. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'09),
Lecture Notes in Computer Science, London, UK, Sept. 2009, Springer-Verlag Berlin Heidelberg
T. Lange, S. Wörz, K. Rohr, and P.M. Schlag.
Experimental comparison of landmark-based methods for 3D elastic registration of pre- and postoperative liver CT data,
in M.I. Miga and K.H. Wong, Proc. SPIE Medical Imaging 2009: Visualization, Image-guided Procedures, and Modeling (MI'09),
Lake Buena Vista, FL/USA, Feb. 2009, SPIE
W.J. Godinez, M. Lampe, S. Wörz, R. Eils, B. Müller, and K. Rohr.
Identifying Fusion Events in Fluorescence Microscopy Images,
in Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09),
Boston, MA/USA, June 2009
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr.
Performance Evaluation of Approaches for Tracking Multiple Virus Particles in Fluorescence Microscopy Image Sequences,
in Proc. Fourth International Workshop on Microscopic Image Analysis with Applications in Biology (MIAAB'09),
Bethesda, MD/USA, September 2009
A. Biesdorf, S. Wörz, H.-J. Kaiser, K. Rohr.
Hybrid Spline-Based Multimodal Registration Using a Local Measure for mutual Information,
in Proc. Workshop Bildverarbeitung für die Medizin (BVM'09),
Informatik aktuell, Heidelberg, Germany, March 2009, Springer-Verlag Berlin Heidelberg
[Pdf]
T. Lange, S. Wörz, K. Rohr, and P.M. Schlag.
Landmark-Based 3D Elastic Registration of Pre- and postoperative Liver CT Data - An Experimental Comparison,
in Proc. Workshop Bildverarbeitung für die Medizin (BVM'09),
Informatik aktuell, Heidelberg, Germany, March 2009, Springer-Verlag Berlin Heidelberg
[Pdf]
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr.
Evaluation of Approaches for Tracking Virus Particles in Fluorescence Microscopy Images,
in Proc. Workshop Bildverarbeitung für die Medizin (BVM'09),
Informatik aktuell, Heidelberg, Germany, March 2009, Springer-Verlag Berlin Heidelberg
[Pdf] BVM award: Best scientific contribution
2008
S. Wörz and K. Rohr,
Hybrid Physics-Based Elastic Image Registration Using Approximating Splines.
In J.M. Reinhardt and J.P.W. Pluim, editors,
Proc. SPIE Medical Imaging 2008: Image Processing (MI'08),
San Diego, CA/USA, Feb. 2008, SPIE.
S. Wörz, S. Heinzer, M. Weiss, and K. Rohr,
Model-based Segmentation and Quantification of Subcellular Structures in 2D and 3D Fluorescent Microscopy Images.
In X.P. Hu and A.V. Clough, editors,
Proc. SPIE Medical Imaging 2008: Physiology, Function, and Structure from Medical Images (MI'08),
San Diego, CA/USA, Feb. 2008, SPIE
S. Wörz, H. von Tengg-Kobligk, V. Henninger, D. Böckler, H.-U. Kauczor, and K. Rohr,
Quantification of the aortic arch morphology in 3D CTA images for endovascular aortic repair (EVAR).
In M.I. Miga and K.R Cleary, editors,
Proc. SPIE Medical Imaging 2008: Visualization, Image-guided Procedures, and Modeling (MI'08),
San Diego, CA/USA, Feb. 2008, SPIE
S. Wörz, M.-L. Winz, and K. Rohr,
Geometric Alignment of 2D Gel Electrophoresis Images Using Physics-Based Elastic Registration.
In Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08),
Paris, France, May 2008
S. Wörz, M.-L. Winz, and K. Rohr,
Geometric Alignment of 2D Gel Electrophoresis Images.
In Proc. Workshop Bildverarbeitung für die Medizin (BVM'08),
Informatik aktuell, Berlin, Germany, April 2008, Springer-Verlag Berlin Heidelberg
[Pdf]
BVM award: Best scientific contribution
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr,
Probabilistic Tracking of Virus Particles in Fluorescence Microscopy Images,
In Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08),
Paris, France, May 2008
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr,
Probabilistic Tracking of Virus Particles in Fluorescence Microscopy Image Sequences.
In Proc. Workshop Bildverarbeitung für die Medizin (BVM'08),
Informatik aktuell, Berlin, Germany, April 2008, Springer-Verlag Berlin Heidelberg
[Pdf]
2007
S. Wörz, C. Kappel, R. Eils, and K. Rohr.
Model-based segmentation and quantification of fluorescent bacteria in 3D microscopy live cell images.
In J.P.W. Pluim and J.M. Reinhardt, editors,
Proc. SPIE Medical Imaging 2007: Image Processing (MI'07),
Proc. SPIE, San Diego, CA/USA, Feb. 2007. SPIE.
S. Wörz and K. Rohr.
3D adaptive model-based segmentation of human vessels.
In A. Manduca and X.P. Hu, editors,
Proc. SPIE Medical Imaging 2007: Physiology, Function, and Structure from Medical Images (MI'07),
Proc. SPIE, San Diego, CA/USA, Feb. 2007. SPIE.
S. Wörz and K. Rohr.
Spline-Based Elastic Image Registration Using Solutions of the Navier Equation.
In J.P.W. Pluim and J.M. Reinhardt, editors,
Proc. SPIE Medical Imaging 2007: Image Processing (MI'07),
Proc. SPIE, San Diego, CA/USA, Feb. 2007. SPIE.
S. Wörz and K. Rohr.
Hybrid Spline-Based Elastic Image Registration Using Analytic Solutions of the Navier Equation.
In A. Horsch, T.M. Deserno, H. Handels, H.-P. Meinzer, and T. Tolxdorff, editors,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'07),
Informatik aktuell, Munich, Germany, pages 151-155, March 2007.
Springer-Verlag Berlin Heidelberg
[Pdf]
BVM award: Poster presentation
S. Wörz and K. Rohr.
Spline-Based Elastic Image Registration with Matix-Valued Basis Functions Using Landmark and Intensity Information.
In F.A. Hamprecht, C. Schnörr, and B. Jähne, editors,
Proc. 29th DAGM Symposium Pattern Recognition (DAGM'07),
volume 4713 of Lecture Notes in Computer Science, Heidelberg, Germany, pages 537-546, September 2007.
Springer-Verlag Berlin Heidelberg.
S. Wörz and K. Rohr.
Elastic Registration of Medical Images with Physics-Based Splines using Intensity and Landmark Information.
In Proc. 6. Jahrestagung der Deutschen Gesellschaft für Computer- und Robotorassistierte Chirurgie (CURAC'07),
Karlsruhe, Germany, October 2007.
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr.
Tracking of Virus Particles in Time-Lapse Fluorescence Microscopy Image Sequences.
In J. Fessler and T. Denney, editors,
Proc. 4th IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07),
Arlington, VA/USA, April 2007.
W.J. Godinez, M. Lampe, S. Wörz, B. Müller, R. Eils, and K. Rohr.
Tracking of Virus Particles in Time-Lapse Fluorescence Microscopy Image Sequences.
In A. Horsch, T.M. Deserno, H. Handels, H.-P. Meinzer, and T. Tolxdorff, editors,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'07),
Informatik aktuell, Munich, Germany, pages 6-10, March 2007.
Springer-Verlag Berlin Heidelberg
[Pdf]
2006
S. Wörz and K. Rohr.
Physics-Based Elastic Image Registration Using Splines and Including Landmark Localization Uncertainties.
In R. Larsen, M. Nielsen, and J. Sporring, editors,
Proc. Ninth Internat. Conf. on Medical Image Computing and Computer-Assisted Intervention
(MICCAI'06),
volume 4191 of Lecture Notes in Computer Science, Copenhagen, Denmark, pages 678-685, Oct. 2006.
Springer-Verlag Berlin Heidelberg.
[Pdf]
[LNCS]
S. Wörz and K. Rohr.
Limits on Estimating the Width of Thin Tubular Structures in 3D Images.
In R. Larsen, M. Nielsen, and J. Sporring, editors,
Proc. Ninth Internat. Conf. on Medical Image Computing and Computer-Assisted Intervention
(MICCAI'06),
volume 4190 of Lecture Notes in Computer Science, Copenhagen, Denmark, pages 215-222, Oct. 2006.
Springer-Verlag Berlin Heidelberg.
[Pdf]
[LNCS]
S. Wörz and K. Rohr.
New Approximating Gaussian Elastic Body Splines for Landmark-Based Registration of Medical Images.
In H. Handels, J. Ehrhardt, A. Horsch, H.-P. Meinzer, and T. Tolxdorff, editors,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'06),
Informatik aktuell, Hamburg, Germany, pages 206-210, March 2006. Springer-Verlag Berlin Heidelberg
[Pdf].
S. Wörz and K. Rohr.
Limits on Estimating the Width of Thin Vessels in 3D Medical Images.
In H. Handels, J. Ehrhardt, A. Horsch, H.-P. Meinzer, and T. Tolxdorff, editors,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'06),
Informatik aktuell, Hamburg, Germany, pages 186-190, March 2006. Springer-Verlag Berlin Heidelberg.
[Pdf]
K. Rohr and S. Wörz.
High-Precision Localization and Quantificiation of 3D Tubular Structures.
In
Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'06),
Arlington, VA/USA, April 2006.
K. Rohr and S. Wörz.
Elastic Registration and Quantification of Biomedical Images.
In
Proc. 9th Korea-Germany Joint Workshop on Advanced Medical Image Processing,
Seoul, South Korea, pages 37-40, September 2006.
2005
S. Wörz and K. Rohr.
Adaptive Model-Based Segmentation of Human Vessels from 3D MRA and CTA Data.
In H.-P. Meinzer, H. Handels, A. Horsch, and T. Tolxdorff, editors,
Proc. Workshop Bildverarbeitung für die Medizin (BVM'05),
Informatik aktuell, Heidelberg, Germany, pages 103-107, March 13-15 2005. Springer-Verlag Berlin Heidelberg.
[Pdf]
2004
S. Wörz and K. Rohr.
A New 3D Parametric Intensity Model for Accurate Segmentation and Quantification of Human Vessels.
In C. Barillot, D.R. Haynor, and P. Hellier, editors, Proc.
7th International Conference on Medical Image Computing and Computer-Assisted Intervention
(MICCAI'04),
Lecture Notes in Computer Science 3216, Saint-Malo, France, pages 491-499, September 2004. Springer-Verlag Berlin
Heidelberg.
[Pdf]
[LNCS]
S. Wörz and K. Rohr.
3D Segmentation and Quantification of Human Vessels based on a New 3D Parametric Intensity Model. In C.E.
Rasmussen et al., editors,
Proc. 26th Pattern Recognition Symposium (DAGM'04), Lecture Notes in
Computer Science, T�bingen, Germany, pages 111-118, August/September 2004. Springer-Verlag Berlin
Heidelberg.
S. Wörz and K. Rohr.
Automatic ROI Size Selection and Parameter Initialization for Model-Based Localization of 3D Anatomical Point Landmarks.
In Proc.
Workshop Bildverarbeitung für die Medizin (BVM'04), Informatik aktuell,
Berlin, Germany, March 2004. Springer-Verlag Berlin Heidelberg. [Pdf]
S. Wörz and K. Rohr.
3D Parametric Intensity Models for Accurate Segmentation and Quantification of Human Arteries.
In Proc. Workshop Bildverarbeitung für die Medizin (BVM'04), Informatik aktuell, Berlin, Germany, March 2004.
Springer-Verlag Berlin Heidelberg. [Pdf]
K. Rohr, P. Cathier, and S. Wörz.
Elastic Registration of Gel Electrophoresis Images Based on Landmarks and Intensities.
In R.M. Leahy and C. Roux , editors,
Proc. IEEE Internat. Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04),
Arlington/VA, USA, pages 1451-1454, April 15-18, 2004.
2003
S. Wörz and K. Rohr.
Localization of Anatomical Point Landmarks in 3D Medical Images by Fitting 3D Parametric Intensity Models.
In Proc. 18th Internat. Conf. on Information Processing in Medical Imaging
(IPMI'03),
Lecture Notes in Computer Science,
Ambleside, UK, pages 76-88, July 2003.
Springer-Verlag Berlin Heidelberg.
[Pdf]
[LNCS]
S. Wörz and K. Rohr.
3D Parametric Intensity Models for the Localization of Different Types of 3D Anatomical Point Landmarks in Tomographic Images.
In B. Michaelis, editor,
Proc. 25th Pattern Recognition Symposium (DAGM'03), Lecture Notes in
Computer Science, Magdeburg, Germany, pages 220-227, September 2003. Springer-Verlag Berlin
Heidelberg.
[Pdf]
[LNCS]
S. Wörz and K. Rohr.
Localization of Anatomical Point Landmarks in 3D Medical Images by Fitting 3D Parametric Intensity Models.
In Proc. Workshop Bildverarbeitung für die Medizin (BVM'03),
Informatik aktuell,
Erlangen, Germany, pages 6-10, March 2003.
Springer-Verlag Berlin Heidelberg.
[Pdf]
R. H. Gong, S. Wörz, and K. Rohr.
Segmentation of Coronary Arteries of the Human Heart from 3D Medical Images.
In Proc. Workshop Bildverarbeitung für die Medizin (BVM'03),
Informatik aktuell,
Erlangen, Germany,
March 2003.
Springer-Verlag Berlin Heidelberg.
[Pdf]
Selected Abstracts
F. Rengier, S. Wörz, W.J. Godinez, D. Böckler, K. Rohr, H.-U. Kauczor, and H. von Tengg-Kobligk,
Quantitative geometric characterization of supra aortic arteries with radiological in vivo imaging for branched endovascular aortic repair.
Internat. J. of Computer Assisted Radiology and Surgery,
Springer Berlin Heidelberg, 138-139, Proc. CARS'08, Barcelona, Spain, June 2008
F. Rengier, S. Wörz, W.J. Godinez, D. Böckler, K. Rohr, H.-U. Kauczor, and H. von Tengg-Kobligk,
Three-dimensional in vivo geometric characterization and mapping of the aortic arch and its branches for advanced endovascular aortic repair.
Proc. CIRSE'08, Copenhagen, DK, September 2008
M. Lampe, W.J. Godinez, J.A.G. Briggs, S. Wörz, D.C. Lamb, C. Bräuchle, R. Eils, K. Rohr, H.-G. Kräusslich, B. Müller.
Analysis of HIV-1 entry by real-time microscopy and automated tracking of dual-colored virus like particles .
In 58. Mosbacher Kolloquium, Protein and lipid sorting in health and disease, GBM,
Mosbach (Baden), Germany, March 2007.
[www]
S. Heinzer, S. Wörz, K. Rohr, M. Weiss.
The secret life of ER Exit Sites.
In Retreat of the DKFZ, Research Program "Functional and Structural Genomics",
Kloster Schöntal (Heilbronn), Germany, Book of Abstracts, page 84, Nov. 2006, DKFZ Heidelberg.
K. Rohr, E. Gladilin, W.J. Godinez, N. Harder, I.-H. Kim, S. Wörz, S. Yang, and R. Eils.
Automated Analysis of Cell Microscopy Images: Registration, Tracking, and Classification.
In Proc. 6th International ELMI Meeting and Workshop on Advanced Light Microscopy (ELMI'06),
Ofir, Portugal, page 30, May/June 2006.
Miscellaneous
S. Wörz and F. Schröder.
Theoretische und experimentelle Untersuchungen zur Anwendung der Wavelettransformation auf die Analyse digitaler Signalstrukturen.
Master's thesis,
University of Hamburg, 2000.